A. thaliana database

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August undefined, 2024

WebJan 1, 1998 · Introduction. The small flowering plant, Arabidopsis thaliana, a member of the mustard family, has become the model system for plant biology.Its unique features allow … WebAAtDB, An Arabidopsis thaliana Database. The latest version of AAtDB is available for UNIX and Macintosh operating systems. To get your own copy of the software, connect …

AraGWAS Catalog

WebNov 20, 2001 · Arabidopsis thaliana genome sequencing has revealed numerous thioredoxin genes among which we have identified AtTRX-o1, ... Looking for thioredoxin sequences in the A. thaliana database has led us to identify one gene encoding a thioredoxin with a putative mitochondrial target signal that we have named AtTRX-o1. … WebThe AraGWAS Catalog is a public and manually curated database for standardised GWAS results for Arabidopsis thaliana. This Database allows to search and filter for public GWASs, phenotypes and genes and to obtain additional meta-information. All GWASs were recomputed following a uniformed methodology to allow for comparable results. Search … long shot precision

AraPheno - A public phenotype database for Arabidopsis thaliana

WebJan 1, 2024 · Arabidopsis thaliana Protein Interactome Database (AtPID) is an object database that integrates data from several bioinformatics prediction methods and manually collected information from the literature. It contains data relevant to protein-protein interaction, protein subcellular location, ortholog maps, domain attributes and gene … WebAraPheno is a public database collection of Arabidopsis thaliana phenotypes. This Database allows to search and filter for public phenotypes and to obtain additional meta … WebAbout TAIR The Arabidopsis Information Resource (TAIR) maintains a database of genetic and molecular biology data for the model higher plant Arabidopsis thaliana.Data … This electronic book from ASPB contains dozens of invited chapters, each … Tools Overview. This page provides links to all the analysis and visualization tools … Data Submission Overview. We encourage users of TAIR to share their data with … News Overview. This page provides news and events for the Arabidopsis research … This section of TAIR's website contains links to documents to help you … For general questions or problems with the data or database, please email the TAIR … About TAIR. The Arabidopsis Information Resource (TAIR) collects information … long shot precision abr

The Arabidopsis Information Resource (TAIR): improved gene

WebBLAST-able datasets include Arabidopsis thaliana genomic DNA, splice-aligned transcripts and proteins, gene models, and other aligned sequences. Spliced alignment of user … WebMay 14, 2024 · Introduction of the Ser2P-specific mintbody into A. thaliana seedlings. To generate a mintbody that can specifically bind to Ser2P, we cloned cDNA from the 42B3 hybridoma cell line for use as the ... longshot powersWebFeb 24, 2005 · INTRODUCTION. Transcription factors are the key regulators of gene expression and play critical roles in the life cycle of higher plants (Gong et al., 2004).Identification and classification of transcription factors in Arabidopsis thaliana are the first step towards understanding its mechanism of gene expression and regulation. A … longshot powder for 357 mag

"WebApr 10, 2024 · Arabidopsis conserved and nonconserved MIRs differed in their localization and genomic context. According to the miRBase database v. 22.1, there were 326 known miRNA stem-loop precursors of 428 mature miRNAs in Arabidopsis (Kozomara et al. 2024).Of them, 99 (30%) belonged to one of 29 conserved families, 113 (35%) were … " - A. thaliana database

A. thaliana database

Arabidopsis_thaliana - Ensembl Genomes 56

WebFeb 6, 2024 · A total of 101 experimentally verified complex structures related to A. thaliana, C. reinhardtii, O. sativa and Z. mays were collected from the PDB database, involving 121 non-redundant binary PPIs. Considering that some PPIs may own multiple sets of complex structures from different structure determination sources, the corresponding complex ... WebFeb 22, 2024 · Figure 3 summarizes the steps involved in identifying putative A. thaliana SCC-related genes, potential A. thaliana SCC-related genes and the SCC homologs. Furthermore, we have included GO terms of the SCC-related genes where a total of 800 biological process, 656 molecular functions and 119 cellular components were included …

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WebThe Arabidopsis Information Resource (TAIR) maintains a database of genetic and molecular biology data for the model higher plant Arabidopsis thaliana. Data available … WebArabidopsis thaliana is a small flowering plant that is widely used as a model organism in plant biology. Arabidopsis is a member of the mustard (Brassicaceae) family, which …

WebJan 1, 2001 · The Database of Arabidopsis thaliana Annotation (D At A) was created to enable easy access to and analysis of all the Arabidopsis genome project annotation. … WebNov 20, 2001 · Arabidopsis thaliana genome sequencing has revealed numerous thioredoxin genes among which we have identified AtTRX-o1, ... Looking for thioredoxin …

WebDec 1, 2024 · a Venn diagram of shared orthologous gene families in PI464715, A. thaliana, M. truncatula, P. sativum, and G. max. The number of gene families is listed for each … WebDec 21, 2010 · AthaMap is a database that generates a genome-wide map of predicted transcription factor binding sites (TFBS) for Arabidopsis thaliana (6, 7). Compared to similar databases for A. thaliana like AGRIS, Athena and ATTED-II ( 8–11 ), AthaMap covers the whole-genome sequence and includes predicted TFBS that were identified with …

WebApr 9, 2024 · This work aimed to comparatively investigate the function of the TDP1 genes by taking advantage of the rich transcriptomics databases available for the Arabidopsis thaliana model plant. A data mining approach was carried out to collect information regarding gene expression in different tissues, genetic backgrounds, and stress …

WebNew genomic data from outside Eurasia challenge our view of A. thaliana history 1195 V. Conclusions 1197 Acknowledgements 1197 References 1197 SUMMARY: Natural … hope meushaw obituaryWebArabidopsis thaliana is a small flowering plant that is widely used as a model organism in plant biology. Arabidopsis is a member of the mustard (Brassicaceae) family, which … long shot precision llcWebJan 1, 2001 · The Database of Arabidopsis thaliana Annotation (DAtA) was created to enable easy access to and analysis of all the Arabidopsis genome project annotation. … hope metropolitan orchestraWebApr 10, 2024 · thaliana was searched in a string database that contains 9.6 million proteins from 2031 organisms [51,52]. The interactome network of each of NAC TF were noted and the results were later used to construct the interactome network of A. thaliana NAC TFs. hope miami lakes united methodist churchWebArabidopsis thaliana is a small flowering plant of mustard family, brassicaceae (Cruciferae). It is distributed throughout the world and was first reported in the sixteenth century by … hope m harrrington taxesWebArabidopsis thaliana is a long established model species for plant molecular biology, genetics and genomics, ... These potentially represent novel spliced genes that are not … longshot printWebJan 14, 2024 · PastDB: An atlas of alternative splicing profiles and functional annotations in A. thaliana.vast-tools [] was used to profile 516 independent RNA-seq datasets comprising a wide diversity of tissues, developmental stages, mutants for RNA-processing factors, and physiological and stressful environments.The barplot shows the number of identified AS … hope mhindu